Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Gm16198-201ENSMUST00000118766 670 ntBASIC17.77■□□□□ 0.44
Trex1Q91XB0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trex1Q91XB0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trex1Q91XB0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Rpph1-201ENSMUST00000175096 319 ntBASIC17.76■□□□□ 0.43
Trex1Q91XB0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trex1Q91XB0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.76■□□□□ 0.43
Trex1Q91XB0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.76■□□□□ 0.43
Trex1Q91XB0 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.76■□□□□ 0.43
Trex1Q91XB0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.76■□□□□ 0.43
Trex1Q91XB0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.76■□□□□ 0.43
Trex1Q91XB0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trex1Q91XB0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.75■□□□□ 0.43
Trex1Q91XB0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.75■□□□□ 0.43
Trex1Q91XB0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trex1Q91XB0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.75■□□□□ 0.43
Trex1Q91XB0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.75■□□□□ 0.43
Trex1Q91XB0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trex1Q91XB0 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.74■□□□□ 0.43
Trex1Q91XB0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.74■□□□□ 0.43
Trex1Q91XB0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.74■□□□□ 0.43
Trex1Q91XB0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trex1Q91XB0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trex1Q91XB0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.73■□□□□ 0.43
Trex1Q91XB0 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.73■□□□□ 0.43
Trex1Q91XB0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trex1Q91XB0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms