Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb17Q91VD8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Gm7862-201ENSMUST00000121461 292 ntBASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Gm38313-201ENSMUST00000191953 1266 ntBASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Gm20239-201ENSMUST00000196610 982 ntBASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Gm19164-201ENSMUST00000210667 640 ntBASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb17Q91VD8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Gm5133-201ENSMUST00000118940 1255 ntBASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb17Q91VD8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb17Q91VD8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Pcdhb17Q91VD8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gm27646-201ENSMUST00000183989 110 ntBASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gm7461-201ENSMUST00000058918 827 ntBASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb17Q91VD8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Gm11452-201ENSMUST00000122376 690 ntBASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb17Q91VD8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms