Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.11■□□□□ 0.17
Trim60Q8VI40 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Gm25016-201ENSMUST00000158399 131 ntBASIC16.11■□□□□ 0.17
Trim60Q8VI40 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim60Q8VI40 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 BC037039-201ENSMUST00000192003 2205 ntBASIC16.1■□□□□ 0.17
Trim60Q8VI40 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.1■□□□□ 0.17
Trim60Q8VI40 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim60Q8VI40 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Gm13312-201ENSMUST00000119631 718 ntBASIC16.09■□□□□ 0.17
Trim60Q8VI40 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Gm7367-201ENSMUST00000057611 492 ntBASIC16.09■□□□□ 0.17
Trim60Q8VI40 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim60Q8VI40 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim60Q8VI40 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim60Q8VI40 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trim60Q8VI40 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim60Q8VI40 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trim60Q8VI40 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms