Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Gm27742-201ENSMUST00000184667 60 ntBASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.61■□□□□ 0.09
Vps39Q8R5L3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Vps39Q8R5L3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps39Q8R5L3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Vps39Q8R5L3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps39Q8R5L3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms