Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Grk6-207ENSMUST00000225925 2769 ntBASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Gm10819-201ENSMUST00000099988 561 ntBASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Top1mtQ8R4U6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Gm34391-201ENSMUST00000203706 907 ntBASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Top1mtQ8R4U6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Top1mtQ8R4U6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Top1mtQ8R4U6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Birc2-201ENSMUST00000054878 378 ntBASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms