Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Gm12644-201ENSMUST00000119935 606 ntBASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Ank2-226ENSMUST00000189368 339 ntBASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim29Q8R2Q0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Gm4459-201ENSMUST00000118750 468 ntBASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.78■□□□□ 0.44
Trim29Q8R2Q0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim29Q8R2Q0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trim29Q8R2Q0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim29Q8R2Q0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms