Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf4Q8K4J2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf4Q8K4J2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf4Q8K4J2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf4Q8K4J2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms