Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.33■□□□□ 0.04
Vps50Q8CI71 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps50Q8CI71 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps50Q8CI71 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Olfr129-201ENSMUST00000122318 993 ntBASIC15.31■□□□□ 0.04
Vps50Q8CI71 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps50Q8CI71 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps50Q8CI71 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps50Q8CI71 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps50Q8CI71 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms