Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SynpoQ8CC35 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.07■□□□□ 0
SynpoQ8CC35 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.07■□□□□ 0
SynpoQ8CC35 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SynpoQ8CC35 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.07■□□□□ 0
SynpoQ8CC35 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SynpoQ8CC35 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.07■□□□□ 0
SynpoQ8CC35 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SynpoQ8CC35 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.06■□□□□ 0
SynpoQ8CC35 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.06■□□□□ 0
SynpoQ8CC35 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.06■□□□□ 0
SynpoQ8CC35 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SynpoQ8CC35 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.06■□□□□ 0
SynpoQ8CC35 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.06■□□□□ 0
SynpoQ8CC35 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.06■□□□□ 0
SynpoQ8CC35 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SynpoQ8CC35 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SynpoQ8CC35 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SynpoQ8CC35 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.05■□□□□ 0
SynpoQ8CC35 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.05■□□□□ 0
SynpoQ8CC35 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SynpoQ8CC35 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SynpoQ8CC35 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.05■□□□□ -0
SynpoQ8CC35 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SynpoQ8CC35 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SynpoQ8CC35 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.05■□□□□ -0
SynpoQ8CC35 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SynpoQ8CC35 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SynpoQ8CC35 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
SynpoQ8CC35 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SynpoQ8CC35 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
SynpoQ8CC35 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.04■□□□□ -0
SynpoQ8CC35 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.04■□□□□ -0
SynpoQ8CC35 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.04■□□□□ -0
SynpoQ8CC35 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms