Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf3Q8C120 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.21■□□□□ 0.19
Sh3rf3Q8C120 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Sh3rf3Q8C120 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Sh3rf3Q8C120 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sh3rf3Q8C120 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Gm18622-201ENSMUST00000219361 595 ntBASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3rf3Q8C120 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3rf3Q8C120 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms