Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm4899-201ENSMUST00000178708 719 ntBASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap1Q8BTW8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm14494-201ENSMUST00000118786 435 ntBASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap1Q8BTW8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdk5rap1Q8BTW8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 251.6 ms