Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scfd1Q8BRF7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.75■□□□□ 0.43
Scfd1Q8BRF7 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm26308-201ENSMUST00000157768 69 ntBASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm10499-201ENSMUST00000174094 934 ntBASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm27301-201ENSMUST00000184012 127 ntBASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Scfd1Q8BRF7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Chchd1-203ENSMUST00000224633 557 ntBASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scfd1Q8BRF7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Gm25925-201ENSMUST00000158314 306 ntBASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Thap2-203ENSMUST00000218989 527 ntBASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scfd1Q8BRF7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Gm15427-201ENSMUST00000117288 531 ntBASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Gm12008-201ENSMUST00000117791 755 ntBASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scfd1Q8BRF7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms