Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4Q8BQZ5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Gm7153-201ENSMUST00000117092 455 ntBASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Birc2-201ENSMUST00000054878 378 ntBASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4Q8BQZ5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gm15372-201ENSMUST00000120729 834 ntBASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gm27867-201ENSMUST00000184778 125 ntBASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4Q8BQZ5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Rprl3-201ENSMUST00000157400 290 ntBASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cpsf4Q8BQZ5 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms