Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nop53Q8BK35 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nop53Q8BK35 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Nop53Q8BK35 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Gm9103-201ENSMUST00000119371 405 ntBASIC16.7■□□□□ 0.26
Nop53Q8BK35 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.7■□□□□ 0.26
Nop53Q8BK35 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.7■□□□□ 0.26
Nop53Q8BK35 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Gm11950-201ENSMUST00000121615 838 ntBASIC16.69■□□□□ 0.26
Nop53Q8BK35 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Mir6404-201ENSMUST00000183699 94 ntBASIC16.69■□□□□ 0.26
Nop53Q8BK35 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.69■□□□□ 0.26
Nop53Q8BK35 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nop53Q8BK35 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Gm6257-201ENSMUST00000163864 910 ntBASIC16.68■□□□□ 0.26
Nop53Q8BK35 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.68■□□□□ 0.26
Nop53Q8BK35 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nop53Q8BK35 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms