Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Samm50Q8BGH2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Gm7153-201ENSMUST00000117092 455 ntBASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Samm50Q8BGH2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 BC037039-201ENSMUST00000192003 2205 ntBASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Samm50Q8BGH2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Samm50Q8BGH2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms