Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Gm9172-201ENSMUST00000212092 954 ntBASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Gm7506-201ENSMUST00000207758 815 ntBASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc116Q80X53 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc116Q80X53 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Gm15372-201ENSMUST00000120729 834 ntBASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.23■□□□□ 0.03
Ccdc116Q80X53 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc116Q80X53 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Gm4459-201ENSMUST00000118750 468 ntBASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc116Q80X53 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms