Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpap1Q80TE0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Gm13517-201ENSMUST00000120782 1495 ntBASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rpap1Q80TE0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Gm15483-201ENSMUST00000120338 456 ntBASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Gm28630-201ENSMUST00000187806 498 ntBASIC23.9■■□□□ 1.42
Rpap1Q80TE0 CT009510.1-201ENSMUST00000227972 270 ntBASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Rpap1Q80TE0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rpap1Q80TE0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rpap1Q80TE0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Rpap1Q80TE0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Gm8410-201ENSMUST00000117225 605 ntBASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC23.88■■□□□ 1.41
Rpap1Q80TE0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Gm11543-201ENSMUST00000120758 370 ntBASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Gm42934-201ENSMUST00000196920 1345 ntBASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpap1Q80TE0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rpap1Q80TE0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms