Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.6■□□□□ 0.57
Sned1Q70E20 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.59■□□□□ 0.57
Sned1Q70E20 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Sned1Q70E20 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.59■□□□□ 0.57
Sned1Q70E20 Gm12091-201ENSMUST00000146791 830 ntBASIC18.59■□□□□ 0.57
Sned1Q70E20 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.59■□□□□ 0.57
Sned1Q70E20 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sned1Q70E20 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sned1Q70E20 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sned1Q70E20 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sned1Q70E20 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sned1Q70E20 Gm13216-201ENSMUST00000117145 591 ntBASIC18.58■□□□□ 0.57
Sned1Q70E20 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.58■□□□□ 0.57
Sned1Q70E20 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Sned1Q70E20 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Sned1Q70E20 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.58■□□□□ 0.57
Sned1Q70E20 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sned1Q70E20 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sned1Q70E20 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sned1Q70E20 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sned1Q70E20 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sned1Q70E20 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Sned1Q70E20 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sned1Q70E20 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.58■□□□□ 0.56
Sned1Q70E20 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Sned1Q70E20 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Sned1Q70E20 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sned1Q70E20 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sned1Q70E20 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sned1Q70E20 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.58■□□□□ 0.56
Sned1Q70E20 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.57■□□□□ 0.56
Sned1Q70E20 Gm43630-201ENSMUST00000201550 776 ntBASIC18.57■□□□□ 0.56
Sned1Q70E20 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.57■□□□□ 0.56
Sned1Q70E20 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.57■□□□□ 0.56
Sned1Q70E20 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sned1Q70E20 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sned1Q70E20 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.57■□□□□ 0.56
Sned1Q70E20 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.57■□□□□ 0.56
Sned1Q70E20 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sned1Q70E20 Gm20445-201ENSMUST00000061905 565 ntBASIC18.57■□□□□ 0.56
Sned1Q70E20 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sned1Q70E20 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.56■□□□□ 0.56
Sned1Q70E20 Mir6420-201ENSMUST00000185032 102 ntBASIC18.56■□□□□ 0.56
Sned1Q70E20 Gm6266-201ENSMUST00000203844 806 ntBASIC18.56■□□□□ 0.56
Sned1Q70E20 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.56■□□□□ 0.56
Sned1Q70E20 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Gm15823-201ENSMUST00000064305 670 ntBASIC18.56■□□□□ 0.56
Sned1Q70E20 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sned1Q70E20 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sned1Q70E20 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sned1Q70E20 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sned1Q70E20 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.55■□□□□ 0.56
Sned1Q70E20 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Sned1Q70E20 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sned1Q70E20 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms