Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm8Q6ZWM4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Gm24589-201ENSMUST00000116692 94 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Gm27646-201ENSMUST00000183989 110 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Gm17971-201ENSMUST00000190239 806 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Lsm8Q6ZWM4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Gm6296-201ENSMUST00000222599 943 ntBASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm8Q6ZWM4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm8Q6ZWM4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm8Q6ZWM4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm8Q6ZWM4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm8Q6ZWM4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm8Q6ZWM4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm8Q6ZWM4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm8Q6ZWM4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms