Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gm4899-201ENSMUST00000178708 719 ntBASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gm27300-201ENSMUST00000184085 97 ntBASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gm27335-201ENSMUST00000184758 97 ntBASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Npc1l1Q6T3U4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Auts2-212ENSMUST00000178555 309 ntBASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Gm7787-201ENSMUST00000216858 688 ntBASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Dancr-204ENSMUST00000132389 2347 ntBASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1l1Q6T3U4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.58■□□□□ 0.57
Npc1l1Q6T3U4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Npc1l1Q6T3U4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Npc1l1Q6T3U4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1l1Q6T3U4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1l1Q6T3U4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1l1Q6T3U4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1l1Q6T3U4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.57■□□□□ 0.56
Npc1l1Q6T3U4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms