Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Gm10154-201ENSMUST00000084445 354 ntBASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Snrnp40Q6PE01 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Snrnp40Q6PE01 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gm5779-201ENSMUST00000218467 910 ntBASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Snrnp40Q6PE01 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm25287-201ENSMUST00000103846 110 ntBASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm22918-201ENSMUST00000103855 110 ntBASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm8318-201ENSMUST00000182954 872 ntBASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snrnp40Q6PE01 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms