Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgb4Q6P8W9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm14494-201ENSMUST00000118786 435 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm8825-201ENSMUST00000182565 998 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm4518-201ENSMUST00000182638 718 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hmgb4Q6P8W9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgb4Q6P8W9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgb4Q6P8W9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms