Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.03■□□□□ -0
Scube1Q6NZL8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.03■□□□□ -0
Scube1Q6NZL8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Gm7791-201ENSMUST00000219066 539 ntBASIC15.03■□□□□ -0
Scube1Q6NZL8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Scube1Q6NZL8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Scube1Q6NZL8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Scube1Q6NZL8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.03■□□□□ -0
Scube1Q6NZL8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scube1Q6NZL8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube1Q6NZL8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
Scube1Q6NZL8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.02■□□□□ -0
Scube1Q6NZL8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scube1Q6NZL8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scube1Q6NZL8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.02□□□□□ -0.01
Scube1Q6NZL8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Gm9731-201ENSMUST00000209480 747 ntBASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scube1Q6NZL8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15□□□□□ -0.01
Scube1Q6NZL8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Mir5130-201ENSMUST00000175160 84 ntBASIC15□□□□□ -0.01
Scube1Q6NZL8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15□□□□□ -0.01
Scube1Q6NZL8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15□□□□□ -0.01
Scube1Q6NZL8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Scube1Q6NZL8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube1Q6NZL8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms