Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt39Q6IFX4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.21■□□□□ 0.35
Krt39Q6IFX4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Krt39Q6IFX4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Krt39Q6IFX4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Krt39Q6IFX4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Krt39Q6IFX4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Krt39Q6IFX4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt39Q6IFX4 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.19■□□□□ 0.34
Krt39Q6IFX4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt39Q6IFX4 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms