Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Gm8344-201ENSMUST00000119813 856 ntBASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdzrn3Q69ZS0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Gm27300-201ENSMUST00000184085 97 ntBASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Gm27335-201ENSMUST00000184758 97 ntBASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 App-207ENSMUST00000227737 2827 ntBASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdzrn3Q69ZS0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Gm11025-201ENSMUST00000140773 466 ntBASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdzrn3Q69ZS0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Gm17271-201ENSMUST00000165535 355 ntBASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pdzrn3Q69ZS0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.02■□□□□ 0.63
Pdzrn3Q69ZS0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Pdzrn3Q69ZS0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pdzrn3Q69ZS0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Gm4899-201ENSMUST00000178708 719 ntBASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdzrn3Q69ZS0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pdzrn3Q69ZS0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19■□□□□ 0.63
Pdzrn3Q69ZS0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdzrn3Q69ZS0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdzrn3Q69ZS0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdzrn3Q69ZS0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms