Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.72□□□□□ -0.37
Col7a1Q63870 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col7a1Q63870 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col7a1Q63870 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.71□□□□□ -0.37
Col7a1Q63870 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.71□□□□□ -0.37
Col7a1Q63870 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.71□□□□□ -0.37
Col7a1Q63870 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col7a1Q63870 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Gm13350-201ENSMUST00000120519 479 ntBASIC12.71□□□□□ -0.38
Col7a1Q63870 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.71□□□□□ -0.38
Col7a1Q63870 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.71□□□□□ -0.38
Col7a1Q63870 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col7a1Q63870 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col7a1Q63870 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col7a1Q63870 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col7a1Q63870 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col7a1Q63870 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Col7a1Q63870 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.7□□□□□ -0.38
Col7a1Q63870 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col7a1Q63870 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col7a1Q63870 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col7a1Q63870 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.7□□□□□ -0.38
Col7a1Q63870 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.7□□□□□ -0.38
Col7a1Q63870 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.7□□□□□ -0.38
Col7a1Q63870 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col7a1Q63870 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm27731-201ENSMUST00000185192 107 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm7584-201ENSMUST00000175829 940 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.69□□□□□ -0.38
Col7a1Q63870 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.69□□□□□ -0.38
Col7a1Q63870 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col7a1Q63870 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm8318-201ENSMUST00000182954 872 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms