Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.33■□□□□ 0.52
Ctr9Q62018 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctr9Q62018 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.33■□□□□ 0.52
Ctr9Q62018 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Gm4899-201ENSMUST00000178708 719 ntBASIC18.32■□□□□ 0.52
Ctr9Q62018 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.32■□□□□ 0.52
Ctr9Q62018 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.32■□□□□ 0.52
Ctr9Q62018 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctr9Q62018 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.31■□□□□ 0.52
Ctr9Q62018 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ctr9Q62018 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.31■□□□□ 0.52
Ctr9Q62018 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.31■□□□□ 0.52
Ctr9Q62018 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.31■□□□□ 0.52
Ctr9Q62018 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.31■□□□□ 0.52
Ctr9Q62018 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctr9Q62018 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.3■□□□□ 0.52
Ctr9Q62018 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ctr9Q62018 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.3■□□□□ 0.52
Ctr9Q62018 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctr9Q62018 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Ctr9Q62018 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.29■□□□□ 0.52
Ctr9Q62018 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ctr9Q62018 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.29■□□□□ 0.52
Ctr9Q62018 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.29■□□□□ 0.52
Ctr9Q62018 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.29■□□□□ 0.52
Ctr9Q62018 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctr9Q62018 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms