Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.84□□□□□ -0.03
Nr1h4Q60641 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.84□□□□□ -0.03
Nr1h4Q60641 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nr1h4Q60641 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Nr1h4Q60641 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1h4Q60641 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1h4Q60641 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nr1h4Q60641 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nr1h4Q60641 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.82□□□□□ -0.04
Nr1h4Q60641 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.82□□□□□ -0.04
Nr1h4Q60641 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1h4Q60641 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.81□□□□□ -0.04
Nr1h4Q60641 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms