Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Gm27397-201ENSMUST00000184997 107 ntBASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Gm43575-201ENSMUST00000196420 516 ntBASIC16.55■□□□□ 0.24
Shroom1Q5SX79 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Gm15358-201ENSMUST00000119249 520 ntBASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom1Q5SX79 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Gm23935-201ENSMUST00000102303 57 ntBASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Gm24270-201ENSMUST00000102326 57 ntBASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Gm24245-201ENSMUST00000157318 57 ntBASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom1Q5SX79 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Mir3113-201ENSMUST00000175478 76 ntBASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.52■□□□□ 0.24
Shroom1Q5SX79 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms