Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Gm15823-201ENSMUST00000064305 670 ntBASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col27a1Q5QNQ9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gm13216-201ENSMUST00000117145 591 ntBASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.84□□□□□ -0.03
Col27a1Q5QNQ9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col27a1Q5QNQ9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col27a1Q5QNQ9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Col27a1Q5QNQ9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col27a1Q5QNQ9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Gm15824-201ENSMUST00000119516 955 ntBASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col27a1Q5QNQ9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.81□□□□□ -0.04
Col27a1Q5QNQ9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.8□□□□□ -0.04
Col27a1Q5QNQ9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms