Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Gm43703-201ENSMUST00000200523 763 ntBASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Gm9257-201ENSMUST00000221254 232 ntBASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps13aQ5H8C4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Asic1-205ENSMUST00000228185 1818 ntBASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps13aQ5H8C4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps13aQ5H8C4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps13aQ5H8C4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms