Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Gm13597-201ENSMUST00000121239 375 ntBASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Gm43575-201ENSMUST00000196420 516 ntBASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Gm8318-201ENSMUST00000182954 872 ntBASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf38aQ4FK66 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf38aQ4FK66 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Gm14822-201ENSMUST00000122247 291 ntBASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38aQ4FK66 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm23935-201ENSMUST00000102303 57 ntBASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm24270-201ENSMUST00000102326 57 ntBASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm24245-201ENSMUST00000157318 57 ntBASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38aQ4FK66 Gm17968-201ENSMUST00000194902 784 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms