Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim80Q3V061 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim80Q3V061 Gm18669-201ENSMUST00000216049 778 ntBASIC16.12■□□□□ 0.17
Trim80Q3V061 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim80Q3V061 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trim80Q3V061 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim80Q3V061 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Trim80Q3V061 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim80Q3V061 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Gm7153-201ENSMUST00000117092 455 ntBASIC16.11■□□□□ 0.17
Trim80Q3V061 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Gm28033-201ENSMUST00000184224 96 ntBASIC16.11■□□□□ 0.17
Trim80Q3V061 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.11■□□□□ 0.17
Trim80Q3V061 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Gm7213-201ENSMUST00000215977 950 ntBASIC16.11■□□□□ 0.17
Trim80Q3V061 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim80Q3V061 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim80Q3V061 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Gm17808-201ENSMUST00000200859 894 ntBASIC16.1■□□□□ 0.17
Trim80Q3V061 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.1■□□□□ 0.17
Trim80Q3V061 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.1■□□□□ 0.17
Trim80Q3V061 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim80Q3V061 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trim80Q3V061 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trim80Q3V061 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim80Q3V061 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim80Q3V061 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim80Q3V061 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms