Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm14722-201ENSMUST00000118943 689 ntBASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl5Q3UTQ8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdkl5Q3UTQ8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdkl5Q3UTQ8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdkl5Q3UTQ8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl5Q3UTQ8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cdkl5Q3UTQ8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl5Q3UTQ8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cdkl5Q3UTQ8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms