Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf149Q3U2C5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Gm18115-201ENSMUST00000221209 621 ntBASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf149Q3U2C5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Gm44450-201ENSMUST00000199528 114 ntBASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf149Q3U2C5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14□□□□□ -0.17
Rnf149Q3U2C5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Gm9013-201ENSMUST00000132939 882 ntBASIC14□□□□□ -0.17
Rnf149Q3U2C5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf149Q3U2C5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms