Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fndc4Q3TR08 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fndc4Q3TR08 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Gm9013-201ENSMUST00000132939 882 ntBASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Gm36967-201ENSMUST00000193814 266 ntBASIC13.3□□□□□ -0.28
Fndc4Q3TR08 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fndc4Q3TR08 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms