Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhej1Q3KNJ2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhej1Q3KNJ2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nhej1Q3KNJ2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nhej1Q3KNJ2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nhej1Q3KNJ2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.25
Nhej1Q3KNJ2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nhej1Q3KNJ2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nhej1Q3KNJ2 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nhej1Q3KNJ2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms