Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdx4Q07424 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdx4Q07424 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdx4Q07424 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.03□□□□□ -0.48
Cdx4Q07424 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.03□□□□□ -0.48
Cdx4Q07424 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.03□□□□□ -0.48
Cdx4Q07424 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Gm5864-201ENSMUST00000202263 970 ntBASIC12.03□□□□□ -0.48
Cdx4Q07424 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdx4Q07424 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.03□□□□□ -0.48
Cdx4Q07424 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.03□□□□□ -0.48
Cdx4Q07424 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx4Q07424 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdx4Q07424 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cdx4Q07424 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx4Q07424 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.48
Cdx4Q07424 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx4Q07424 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx4Q07424 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cdx4Q07424 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx4Q07424 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.02□□□□□ -0.48
Cdx4Q07424 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
Cdx4Q07424 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx4Q07424 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx4Q07424 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.02□□□□□ -0.49
Cdx4Q07424 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Prob1-201ENSMUST00000097619 3021 ntBASIC12.02□□□□□ -0.49
Cdx4Q07424 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx4Q07424 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx4Q07424 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.02□□□□□ -0.49
Cdx4Q07424 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdx4Q07424 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx4Q07424 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms