Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.87□□□□□ -0.19
SgcbP82349 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SgcbP82349 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SgcbP82349 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SgcbP82349 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SgcbP82349 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.86□□□□□ -0.19
SgcbP82349 Gm7230-201ENSMUST00000173026 815 ntBASIC13.86□□□□□ -0.19
SgcbP82349 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.86□□□□□ -0.19
SgcbP82349 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.86□□□□□ -0.19
SgcbP82349 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SgcbP82349 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SgcbP82349 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SgcbP82349 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SgcbP82349 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.86□□□□□ -0.19
SgcbP82349 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.86□□□□□ -0.19
SgcbP82349 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SgcbP82349 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SgcbP82349 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Gm7222-201ENSMUST00000117512 906 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SgcbP82349 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Mir5131-201ENSMUST00000175426 93 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.85□□□□□ -0.19
SgcbP82349 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SgcbP82349 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.85□□□□□ -0.19
SgcbP82349 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.85□□□□□ -0.19
SgcbP82349 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SgcbP82349 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SgcbP82349 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms