Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm13836-201ENSMUST00000121159 501 ntBASIC15.45■□□□□ 0.06
Crnkl1P63154 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Gm7889-201ENSMUST00000185591 958 ntBASIC15.45■□□□□ 0.06
Crnkl1P63154 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Gm9987-201ENSMUST00000069768 567 ntBASIC15.45■□□□□ 0.06
Crnkl1P63154 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Crnkl1P63154 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.45■□□□□ 0.06
Crnkl1P63154 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Crnkl1P63154 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.44■□□□□ 0.06
Crnkl1P63154 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.44■□□□□ 0.06
Crnkl1P63154 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.44■□□□□ 0.06
Crnkl1P63154 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.44■□□□□ 0.06
Crnkl1P63154 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.44■□□□□ 0.06
Crnkl1P63154 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Crnkl1P63154 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.44■□□□□ 0.06
Crnkl1P63154 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Crnkl1P63154 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Crnkl1P63154 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.43■□□□□ 0.06
Crnkl1P63154 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.43■□□□□ 0.06
Crnkl1P63154 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Il3ra-202ENSMUST00000223589 738 ntBASIC15.43■□□□□ 0.06
Crnkl1P63154 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Crnkl1P63154 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Crnkl1P63154 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.42■□□□□ 0.06
Crnkl1P63154 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Crnkl1P63154 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Crnkl1P63154 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.42■□□□□ 0.06
Crnkl1P63154 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Gm18959-201ENSMUST00000208954 655 ntBASIC15.42■□□□□ 0.06
Crnkl1P63154 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.42■□□□□ 0.06
Crnkl1P63154 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Crnkl1P63154 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Crnkl1P63154 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.42■□□□□ 0.06
Crnkl1P63154 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Crnkl1P63154 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms