Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm5P62322 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Gm18284-201ENSMUST00000172604 624 ntBASIC13.01□□□□□ -0.33
Lsm5P62322 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Lsm5P62322 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm5P62322 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm5P62322 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13□□□□□ -0.33
Lsm5P62322 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Gm7712-202ENSMUST00000222331 1510 ntBASIC13□□□□□ -0.33
Lsm5P62322 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13□□□□□ -0.33
Lsm5P62322 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13□□□□□ -0.33
Lsm5P62322 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lsm5P62322 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm5P62322 Gm10605-202ENSMUST00000183019 3198 ntBASIC13□□□□□ -0.33
Lsm5P62322 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Lsm5P62322 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lsm5P62322 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.99□□□□□ -0.33
Lsm5P62322 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm5P62322 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm5P62322 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Lsm5P62322 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Lsm5P62322 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.99□□□□□ -0.33
Lsm5P62322 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lsm5P62322 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.99□□□□□ -0.33
Lsm5P62322 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm5P62322 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm5P62322 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm5P62322 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.98□□□□□ -0.33
Lsm5P62322 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm5P62322 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms