Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Gm9103-201ENSMUST00000119371 405 ntBASIC13.74□□□□□ -0.21
Sec61a1P61620 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sec61a1P61620 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sec61a1P61620 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.73□□□□□ -0.21
Sec61a1P61620 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.73□□□□□ -0.21
Sec61a1P61620 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sec61a1P61620 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.72□□□□□ -0.21
Sec61a1P61620 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sec61a1P61620 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.72□□□□□ -0.21
Sec61a1P61620 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sec61a1P61620 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Gm18115-201ENSMUST00000221209 621 ntBASIC13.72□□□□□ -0.21
Sec61a1P61620 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sec61a1P61620 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.72□□□□□ -0.21
Sec61a1P61620 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sec61a1P61620 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sec61a1P61620 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sec61a1P61620 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.71□□□□□ -0.21
Sec61a1P61620 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Gm44450-201ENSMUST00000199528 114 ntBASIC13.71□□□□□ -0.21
Sec61a1P61620 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.71□□□□□ -0.21
Sec61a1P61620 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms