Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Grk6-207ENSMUST00000225925 2769 ntBASIC14.69□□□□□ -0.06
Nup43P59235 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.69□□□□□ -0.06
Nup43P59235 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nup43P59235 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.69□□□□□ -0.06
Nup43P59235 Gm6089-201ENSMUST00000197666 938 ntBASIC14.69□□□□□ -0.06
Nup43P59235 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.69□□□□□ -0.06
Nup43P59235 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup43P59235 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Gm15358-201ENSMUST00000119249 520 ntBASIC14.68□□□□□ -0.06
Nup43P59235 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Nup43P59235 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Gm27646-201ENSMUST00000183989 110 ntBASIC14.68□□□□□ -0.06
Nup43P59235 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.68□□□□□ -0.06
Nup43P59235 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup43P59235 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.68□□□□□ -0.06
Nup43P59235 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup43P59235 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nup43P59235 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.67□□□□□ -0.06
Nup43P59235 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.67□□□□□ -0.06
Nup43P59235 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nup43P59235 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nup43P59235 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.67□□□□□ -0.06
Nup43P59235 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.67□□□□□ -0.06
Nup43P59235 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Nup43P59235 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup43P59235 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nup43P59235 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.66□□□□□ -0.06
Nup43P59235 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nup43P59235 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nup43P59235 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.66□□□□□ -0.06
Nup43P59235 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.66□□□□□ -0.06
Nup43P59235 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup43P59235 Gm7461-201ENSMUST00000058918 827 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms