Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Gm27867-201ENSMUST00000184778 125 ntBASIC15.91■□□□□ 0.14
Tubgcp3P58854 Gm9172-201ENSMUST00000212092 954 ntBASIC15.91■□□□□ 0.14
Tubgcp3P58854 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.91■□□□□ 0.14
Tubgcp3P58854 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Tubgcp3P58854 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tubgcp3P58854 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm25745-201ENSMUST00000174945 133 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm8825-201ENSMUST00000182565 998 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm4518-201ENSMUST00000182638 718 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.9■□□□□ 0.14
Tubgcp3P58854 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tubgcp3P58854 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Tubgcp3P58854 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.88■□□□□ 0.13
Tubgcp3P58854 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tubgcp3P58854 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Gm17807-201ENSMUST00000186869 298 ntBASIC15.88■□□□□ 0.13
Tubgcp3P58854 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tubgcp3P58854 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms