Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh5P55284 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Cdh5P55284 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdh5P55284 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdh5P55284 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.2■□□□□ 0.02
Cdh5P55284 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdh5P55284 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.19■□□□□ 0.02
Cdh5P55284 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdh5P55284 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdh5P55284 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdh5P55284 Gm27741-201ENSMUST00000185060 237 ntBASIC15.19■□□□□ 0.02
Cdh5P55284 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Cdh5P55284 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh5P55284 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.18■□□□□ 0.02
Cdh5P55284 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.18■□□□□ 0.02
Cdh5P55284 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh5P55284 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh5P55284 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.18■□□□□ 0.02
Cdh5P55284 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cdh5P55284 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Gm27357-201ENSMUST00000183754 135 ntBASIC15.18■□□□□ 0.02
Cdh5P55284 Gm17971-201ENSMUST00000190239 806 ntBASIC15.18■□□□□ 0.02
Cdh5P55284 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cdh5P55284 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.18■□□□□ 0.02
Cdh5P55284 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh5P55284 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 BC037039-201ENSMUST00000192003 2205 ntBASIC15.17■□□□□ 0.02
Cdh5P55284 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdh5P55284 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh5P55284 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Cdh5P55284 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdh5P55284 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh5P55284 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdh5P55284 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms