Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Nek1P51954 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Nek1P51954 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.34■□□□□ 0.37
Nek1P51954 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.34■□□□□ 0.37
Nek1P51954 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek1P51954 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek1P51954 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek1P51954 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek1P51954 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek1P51954 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek1P51954 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek1P51954 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nek1P51954 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Nek1P51954 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.33■□□□□ 0.36
Nek1P51954 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.33■□□□□ 0.36
Nek1P51954 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.33■□□□□ 0.36
Nek1P51954 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek1P51954 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.32■□□□□ 0.36
Nek1P51954 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.32■□□□□ 0.36
Nek1P51954 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Nek1P51954 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nek1P51954 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.32■□□□□ 0.36
Nek1P51954 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.32■□□□□ 0.36
Nek1P51954 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Nek1P51954 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nek1P51954 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nek1P51954 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.31■□□□□ 0.36
Nek1P51954 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Nek1P51954 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.31■□□□□ 0.36
Nek1P51954 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.31■□□□□ 0.36
Nek1P51954 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nek1P51954 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nek1P51954 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nek1P51954 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nek1P51954 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek1P51954 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.3■□□□□ 0.36
Nek1P51954 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek1P51954 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek1P51954 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nek1P51954 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nek1P51954 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek1P51954 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nek1P51954 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms