Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.29■□□□□ 0.36
Brca1P48754 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Brca1P48754 Gm9063-201ENSMUST00000223299 582 ntBASIC17.29■□□□□ 0.36
Brca1P48754 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.29■□□□□ 0.36
Brca1P48754 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Brca1P48754 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Brca1P48754 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.28■□□□□ 0.36
Brca1P48754 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.28■□□□□ 0.36
Brca1P48754 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Brca1P48754 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Brca1P48754 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.28■□□□□ 0.36
Brca1P48754 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.28■□□□□ 0.36
Brca1P48754 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Brca1P48754 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.27■□□□□ 0.36
Brca1P48754 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Brca1P48754 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brca1P48754 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.26■□□□□ 0.35
Brca1P48754 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Brca1P48754 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Brca1P48754 Gm11543-201ENSMUST00000120758 370 ntBASIC17.26■□□□□ 0.35
Brca1P48754 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.26■□□□□ 0.35
Brca1P48754 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.26■□□□□ 0.35
Brca1P48754 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.26■□□□□ 0.35
Brca1P48754 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Brca1P48754 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Brca1P48754 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.26■□□□□ 0.35
Brca1P48754 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.26■□□□□ 0.35
Brca1P48754 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.26■□□□□ 0.35
Brca1P48754 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.26■□□□□ 0.35
Brca1P48754 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brca1P48754 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.25■□□□□ 0.35
Brca1P48754 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.25■□□□□ 0.35
Brca1P48754 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.25■□□□□ 0.35
Brca1P48754 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.25■□□□□ 0.35
Brca1P48754 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.25■□□□□ 0.35
Brca1P48754 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.25■□□□□ 0.35
Brca1P48754 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Brca1P48754 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms