Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.68□□□□□ -0.22
GdnfP48540 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GdnfP48540 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Gm11355-201ENSMUST00000121120 306 ntBASIC13.67□□□□□ -0.22
GdnfP48540 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GdnfP48540 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GdnfP48540 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.66□□□□□ -0.22
GdnfP48540 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GdnfP48540 Gm6659-201ENSMUST00000174752 547 ntBASIC13.66□□□□□ -0.22
GdnfP48540 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
GdnfP48540 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.66□□□□□ -0.22
GdnfP48540 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GdnfP48540 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GdnfP48540 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.65□□□□□ -0.22
GdnfP48540 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Gm23634-201ENSMUST00000175071 91 ntBASIC13.65□□□□□ -0.22
GdnfP48540 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.65□□□□□ -0.22
GdnfP48540 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GdnfP48540 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GdnfP48540 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.64□□□□□ -0.23
GdnfP48540 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GdnfP48540 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GdnfP48540 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms