Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Sox6P40645 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.65□□□□□ -0.06
Sox6P40645 Gm45328-201ENSMUST00000210942 917 ntBASIC14.65□□□□□ -0.06
Sox6P40645 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox6P40645 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox6P40645 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox6P40645 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Sox6P40645 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox6P40645 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sox6P40645 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Sox6P40645 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Sox6P40645 App-207ENSMUST00000227737 2827 ntBASIC14.64□□□□□ -0.07
Sox6P40645 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox6P40645 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Sox6P40645 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.64□□□□□ -0.07
Sox6P40645 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.64□□□□□ -0.07
Sox6P40645 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Sox6P40645 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox6P40645 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Sox6P40645 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox6P40645 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Sox6P40645 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Gm33142-201ENSMUST00000193913 867 ntBASIC14.63□□□□□ -0.07
Sox6P40645 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox6P40645 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.63□□□□□ -0.07
Sox6P40645 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.63□□□□□ -0.07
Sox6P40645 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox6P40645 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox6P40645 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox6P40645 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Sox6P40645 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.62□□□□□ -0.07
Sox6P40645 Gm10052-201ENSMUST00000168019 960 ntBASIC14.62□□□□□ -0.07
Sox6P40645 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.62□□□□□ -0.07
Sox6P40645 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Gm7729-201ENSMUST00000050143 801 ntBASIC14.62□□□□□ -0.07
Sox6P40645 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms