Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Gm25144-201ENSMUST00000179561 110 ntBASIC15.97■□□□□ 0.15
Cxcl12P40224 Gm25352-201ENSMUST00000179815 110 ntBASIC15.97■□□□□ 0.15
Cxcl12P40224 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Gm44855-201ENSMUST00000205725 362 ntBASIC15.97■□□□□ 0.15
Cxcl12P40224 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.97■□□□□ 0.15
Cxcl12P40224 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Haglr-201ENSMUST00000100000 2085 ntBASIC15.96■□□□□ 0.15
Cxcl12P40224 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.96■□□□□ 0.15
Cxcl12P40224 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.96■□□□□ 0.15
Cxcl12P40224 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Gm12490-201ENSMUST00000120255 560 ntBASIC15.96■□□□□ 0.15
Cxcl12P40224 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.96■□□□□ 0.15
Cxcl12P40224 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.96■□□□□ 0.15
Cxcl12P40224 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.96■□□□□ 0.15
Cxcl12P40224 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl12P40224 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cxcl12P40224 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Cxcl12P40224 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cxcl12P40224 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Gm10499-201ENSMUST00000174094 934 ntBASIC15.95■□□□□ 0.14
Cxcl12P40224 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cxcl12P40224 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.95■□□□□ 0.14
Cxcl12P40224 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cxcl12P40224 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.94■□□□□ 0.14
Cxcl12P40224 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cxcl12P40224 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms